[ensembl-dev] ncRNA gene trees in NEWICK format

[Albert Vilella]

A dump for the ncRNA trees is produced in different formats, one of them is
newick:

ftp://ftp.ensembl.org/pub/current_emf/ensembl-compara/homologies/Compara.67.ncrna.nh.emf.gz

A.

On Mon, Jul 2, 2012 at 9:20 AM, Marc P. Hoeppner <mphoeppner at gmail.com>wrote:

> Hi,
>
> google wasn't being helpful with this particular problem, so I'll try it
> here:
>
> I am looking for a short script (or some helpful explanation) that allows
> me to produce a newick-formatted gene tree for a non-coding RNA. The only
> examples I was able to find seem to be based on a much earlier version of
> the API and I had no luck getting it to work.
>
> Any help would be greatly appreciated!
>
> /Marc
>
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