[ensembl-dev] "subseq" error

[Will McLaren]

Hello,

Are you able to provide an example of the line that is causing this issue?

Thanks

Will McLaren
Ensembl Variation

On 28 February 2012 11:13, S Venkata Suresh Kumar
<suresh.surampudi at india.semanticbits.com> wrote:
> Hi All
>
> When i am trying to convert a hgvs file to vcf file, I am getting
> following error:
>
> "Can't call method "subseq" on an undefined value at
> /opt/vep/ensembl-variation/modules/Bio/EnsEMBL/Variation/DBSQL/VariationFeatureAdaptor.pm
> line 1272, <GEN0> line 1."
>
> any clues ?
>
> I am using vep 2.4, OS linux, bioperl 1.6.901-2.
>
> regards
> vs
>
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