[ensembl-dev] how to get D.melanogaster and D.virilis alignment from compara

Sergei Manakov manakov at ebi.ac.uk
Sat Feb 18 08:00:03 GMT 2012


I went through Compara API Tutorial
and tried to adopt the example scripts to get the alignment blocks
between "dosophila_melanogaster" and "drosophila_virilis".

It seems that "drsophila_virilis" doesn't work in:

my $this_meta_container_adaptor =
Bio::EnsEMBL::Registry->get_adaptor("drosophila_virilis", 'core',

So is it possible to get melanogaster and virilis alignment from the
ensembl? If yes, maybe somebody has a working code for that?


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