[ensembl-dev] Transcript length(bp) and transcript length(aa)
enrico1970 at yahoo.com
enrico1970 at yahoo.com
Sun Aug 26 23:58:14 BST 2012
I am
confused about the definitions of Transcript length(bp) and transcript
length(aa) in the Vega genome browser.
Transcript length aa should be equal to a third of the transcript
length bp minus the intronic areas while this does not happen in in none of the transcripts at http://vega.sanger.ac.uk/Homo_sapiens/Transcript/Summary?g=OTTHUMG00000150835;r=22:22273793-22307209;t=OTTHUMT00000320267
e.g. the sum
of exons of the transcript OTTHUMP00000198593 is 5143 bp but the protein OTTHUMP00000198593 has length 454 amino acids instead of 1714
Kind regards,
Enrico
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