[ensembl-dev] Bug in XrefParser::ProcessData

Andy Yates ayates at ebi.ac.uk
Mon Aug 13 17:01:42 BST 2012


Hi Ken,

Thanks for the bug report I've committed the change into HEAD.

Andy

Andrew Yates                   Ensembl Core Software Project Leader
EMBL-EBI                       Tel: +44-(0)1223-492538
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensembl.org/

On 13 Aug 2012, at 16:36, Youens-Clark, Ken wrote:

> I believe I have found a bug in XrefParser::ProcessData.  Below is a diff that seems to fix the problem.
> 
> [kclark at blade169 XrefParser]$ cvs diff ProcessData.pm 
> Index: ProcessData.pm
> ===================================================================
> RCS file: /cvsroot/ensembl/ensembl/misc-scripts/xref_mapping/XrefParser/ProcessData.pm,v
> retrieving revision 1.3
> diff -r1.3 ProcessData.pm
> 677c677
> <       show_valid_species();
> ---
>>      $self->show_valid_species();
> 
> --
> Ken Youens-Clark
> kclark at cshl.edu
> Ware Lab/CSHL/USDA-ARS
> 
> 
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