[ensembl-dev] a caching question?

[Anne Parker]

Unfortunately I'm getting a 500 error on that URL...

On 27 Apr 2012, at 15:00, Thomason, James wrote:

> I've gotta have something else going on then, I've been restarting the web server between all of my edits and still can't get them to show up. I was hoping I was running into an issue where the page was being cached on disk and that was something I could clear out.
> 
> Here's what I'm doing -
> 
> Hitting this page:
> http://dev.gramene.org/Arabidopsis_thaliana/Transcript/Ontology/Table?db=core;g=AT3G52430;oid=1;r=3:19431371-19434403;t=AT3G52430.1
> 
> And clicking on the "General Identifiers" link on the left under External References. It looks like the result is rendered out of code in Ensembl::Web::Component, specifically in the _matches method. But no matter how much I mess with it, I can't change the output on the page.
> 
> If it's not a caching issue, then I have to just be looking in the wrong spot. Could someone point me in the right direction?
> 
> On Apr 26, 2012, at 3:18 AM, Jay Humphrey wrote:
> 
> Yes, there is caching of the source code.  You woul have to restart the server every time you make a change, or add Apache2::Reload to the apache/mod_perl configuration.
> In conf/httpd.conf, just before the <Perl> section, add:...
> 
> On 26/04/2012 00:01, Thomason, James wrote:
> Gang,
> 
> I'm working on another exporting gimmick and am having trouble. I've mostly tracked it down, but am trying to isolate what looks like a bug to me. My issue is that no matter where I seem to add in debugging code to ensembl to trace it back, it's never getting executed. I'm trying to add some debugging lines to EnsEMBL::Web::Component, but nothing's showing up.
> 
> So my questions -
> 1) Is there some cache that's butting in here? And, can I clear it out easily enough?
> or
> 2) Is there some other file I should be editing instead? A plugin or something?
> 
> Many thanks, as always.
> 
> --
> -Jim Thomason...
> 
> Scientific Informatics Developer @ The Ware Lab,
> a USDA-ARS Laboratory at Cold Spring Harbor Laboratory
> http://www.warelab.org/
> http://www.cshl.edu/
> 
> 
> _______________________________________________
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> 
> --
> Jay Humphrey                   Ensembl Genomes Web Developer
> EMBL-EBI                       Tel: +44-(0)1223-492682
> Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
> Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/
> 
> 
> 
> _______________________________________________
> Dev mailing list    Dev at ensembl.org<mailto:Dev at ensembl.org>
> List admin (including subscribe/unsubscribe): http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/
> 
> --
> -Jim Thomason...
> 
> Scientific Informatics Developer @ The Ware Lab,
> a USDA-ARS Laboratory at Cold Spring Harbor Laboratory
> http://www.warelab.org/
> http://www.cshl.edu/
> 
> 
> _______________________________________________
> Dev mailing list    Dev at ensembl.org
> List admin (including subscribe/unsubscribe): http://lists.ensembl.org/mailman/listinfo/dev
> Ensembl Blog: http://www.ensembl.info/

Anne Parker
Ensembl Web Production Manager
http://www.ensembl.org