[ensembl-dev] Biomart configure error

陈岗 danielchen06 at gmail.com
Tue Sep 27 12:11:53 BST 2011


Hi All

I try to add Biomart into Ensembl local service,  already changed the
configure files, including Plugins.pm, martresults.PLS, martservices.PLS,
martview.PLS, settings.conf, Web.pm and copied *.tt files to custom
directory. Ensembl release 63, Biomart release 0.6.

When starts Ensembl, there is a error:

Global symbol "$background_file_dir" requires explicit package name at
/usr/local/ensembl/biomart-perl/lib/BioMart/Web.pm line 1983.\nGlobal symbol
"$background_file_dir" requires explicit package name at
/usr/local/ensembl/biomart-perl/lib/BioMart/Web.pm line 1984.\nCompilation
failed in require at /usr/local/ensembl/conf/perl.startup line 58.\n\t(in
cleanup) Global symbol "$background_file_dir"  requires explicit package
name at /usr/local/ensembl/biomart-perl/lib/BioMart/Web.pm line
1983.\nGlobal symbol "$background_file_dir" requires explicit package name
at /usr/local/ensembl/biomart-perl/lib/BioMart/Web.pm line 1984.\nCompilati
on failed in require at /usr/local/ensembl/conf/perl.startup line
58.\nCompilati on failed in require at /usr/local/ensembl/conf/httpd.conf
line 310.\n

How to solve it ?

Thanks million.

Daniel
-- 
TILSI
Taicang Institute for Life Science Information,China
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