[ensembl-dev] Error when doing a search on an Ensembl mirror

Diogo Costa costa.h4evr at gmail.com
Mon Nov 7 17:01:23 GMT 2011


Ok, fixed it :)

A simple "if defined $results;" in line 149 did the trick.

Thank you Anne for pointing me in the right direction :)

On Mon, Nov 7, 2011 at 4:59 PM, Diogo Costa <costa.h4evr at gmail.com> wrote:

> Hi,
>
> I tried searching for a known scaffold and it did not failed, so you must
> be right!
>
> If you could fix it it would be very nice thank you :) I'll try to fix it
> too, so I'll let you know if I fix it.
>
> Thank you!
>
> On Mon, Nov 7, 2011 at 4:45 PM, Anne Parker <ap5 at sanger.ac.uk> wrote:
>
>> Hi Diogo
>>
>> Do all your searches fail? It looks like the text search is failing to
>> return any results.
>>
>> I can patch the code so that the relevant method always returns an
>> arrayref - then we can see if it fixes your problem!
>>
>> Cheers
>>
>> Anne
>>
>>
>>
>> On 7 Nov 2011, at 16:27, Diogo Costa wrote:
>>
>> > Hello,
>> >
>> > I installed an Ensembl mirror and realized that the search
>> functionality is not working (error 500).
>> > I consulted the error logs and it has the following message:
>> >
>> > [Mon Nov 07 16:13:58 2011] [error] [client ::1] Can't use an undefined
>> value as an ARRAY reference at
>> /usr/local/ensembl/modules/EnsEMBL/Web/Factory/Search.pm line 149.\n,
>> referer:
>> http://drosophila.ibmc.up.pt/Drosophila_virilis/Location/Genome?r=scaffold_13049:10294877-10343354
>> >
>> > Am I missing some setting or something? I searched the webs and it
>> doesn't seems to be a common error...
>> >
>> > Thank you in advance,
>> > Diogo
>> > _______________________________________________
>> > Dev mailing list    Dev at ensembl.org
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>> > Ensembl Blog: http://www.ensembl.info/
>>
>> Anne Parker
>> Ensembl Web Production Manager
>> http://www.ensembl.org
>>
>>
>>
>>
>>
>> --
>>  The Wellcome Trust Sanger Institute is operated by Genome Research
>>  Limited, a charity registered in England with number 1021457 and a
>>  company registered in England with number 2742969, whose registered
>>  office is 215 Euston Road, London, NW1 2BE.
>>
>
>
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