[ensembl-dev] Gene Tree ambiguous nodes

Sébastien Moretti sebastien.moretti at unil.ch
Mon May 16 15:00:37 BST 2011


I wonder how ambiguous nodes are defined in gene trees.
Nothing seems to be attached to the D flag in NHX labels for ambiguous 

ambiguous nodes seem to be related to bootstrap values.
Is it true ?

If true, what is the bootstrap threshold you use to define a node as 
ambiguous ?


Sébastien Moretti
Department of Ecology and Evolution,
Biophore, University of Lausanne,
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4221/4079

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