[ensembl-dev] Style for dynamically loaded GFF

[Anne Parker]

On 29 Mar 2011, at 21:01, Ken Youens-Clark wrote:

> Hi,
>
> I would like to add some style information to a dynamically loaded  
> GFF file, e.g.:
>
> 	http://www.gramene.org/Oryza_sativa/Location/View?r=1:3000-18000;contigviewbottom=url:http://brie.cshl.edu/kyc/rice_3514.gff=normal
>
> Is it possible for me to add into the "rice_3514.gff" something to  
> have the different features (e.g., "gene," "exon," "match," etc.)  
> drawn differently?  As it is, they all just get grouped as big red  
> blocks.
>
> --
> Ken Youens-Clark
> kclark at cshl.edu
> Gramene.org Project Manager
> Ware Lab/CSHL/USDA-ARS
>


Hi Ken

At the moment we only support a limited number of styling options,  
which does not include changing the drawing style. That's something  
we've been asked about, but our main focus in recent releases has been  
on supporting additional file formats.

You can see the available options here:

http://www.ensembl.org/info/website/upload/index.html#formats

Cheers

Anne


Anne Parker
Ensembl Web Production Manager
http://www.ensembl.org