[ensembl-dev] EnsEMBL SOAP / Rest services?

Jared Nedzel jnedzel at broadinstitute.org
Thu Jul 14 21:08:40 BST 2011


Jan:

I'm not familiar with catalyst or sloth.  This was developed some time back,
using Java, Hibernate, and Axis.

We don't have the code on a public site, but if you send me a bit about your
institution, I'll check with my manager and see if we can get the code.

Jared

On Thu, Jul 14, 2011 at 3:47 PM, Jan Vogel <jan.vogel at gmail.com> wrote:

> Cool. Did you guys use catalyst to implement this, or sloth ? and is the
> code open-source ?
> Jan
>
> On Jul 14, 2011, at 11:14 AM, Jared Nedzel wrote:
>
> Glenn:
>
> We created a REST interface when we developed GeneCruiser, which uses
> Ensembl as its data store.  Unfortunately, it has been difficult for us to
> keep abreast of the frequent Ensembl databaes schema updates.
>
> We have documented our current REST-style interface here:
>
>
> http://genecruiser.broadinstitute.org/genecruiser3/pages/GeneCruiser3WebServices.pdf
>
> It would be great if Ensembl would consider doing something similar.  The
> Ensembl Perl API just isn't a viable option for us.
>
> Thanks,
>
> Jared Nedzel
> Broad Institute
>
> On Thu, Jul 14, 2011 at 11:03 AM, Glenn Proctor <glenn at ebi.ac.uk> wrote:
>
>> Hi Dan
>>
>> Not at the moment, but a REST interface (probably a wrapper around the
>> Perl API) is something that we're actively considering.
>>
>> We're interested in possible use-cases; can you give us some more
>> details on what you want to do?
>>
>> Glenn.
>>
>>
>> On Thu, Jul 14, 2011 at 3:24 PM, Dan Bolser <dan.bolser at gmail.com> wrote:
>> > Hi,
>> >
>> > Are there any SOAP or REST services for the EnsEMBL APIs?
>> >
>> > I'm thinking to put something simple together to let us access
>> > variation data from a JavaScript application, but I thought I'd email
>> > and ask what has been done in this direction before launching out.
>> >
>> >
>> > Cheers,
>> > Dan.
>> >
>> > _______________________________________________
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>> >
>> >
>>
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>
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>
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