[ensembl-dev] Loading VCF?

Will McLaren wm2 at ebi.ac.uk
Thu Dec 1 14:36:00 GMT 2011


Hi Dan,

http://cvs.sanger.ac.uk/cgi-bin/viewvc.cgi/ensembl-variation/scripts/import/import_vcf.pl?revision=1.19&root=ensembl&pathrev=branch-ensembl-64

Not sure why the script isn't in that FTP dir, I guess it is not in
sync with the CVS server?

Will

On 1 December 2011 14:29,  <dbolser at ebi.ac.uk> wrote:
> Is there a script for loading VCF files into an ensembl-variation database?
>
> I tried searching the mailing list and looking here:
> ftp://ftp.ensembl.org/pub/ensembl-variation/scripts/import/
>
> but I didn't find anything specifically for loading VCF.
>
>
> Cheers,
> Dan.
>
>
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