[ensembl-dev] How to get AlignSlice objects

Marc P. Hoeppner mphoeppner at gmail.com
Mon Aug 29 09:17:59 BST 2011


Hi,

so I continue on my quest to wrap my head around the PERL Api...

My current problem concerns the AlignSlice class and how to get get such 
an object starting from a GenomicAlignBlock. All I was able to produce 
are single slices, but no align slices. I'd be glad if anyone could 
point out (conceptually, no detailed code required) how AlignSlices are 
obtained from blocks of individual genomic aligns.

Cheers,
Marc




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