[ensembl-dev] new snp effect predictor script

Andrea Edwards edwardsa at cs.man.ac.uk
Sat Apr 23 03:09:44 BST 2011


Hello

Looking at the new version of the snp effect predictor script and 
TranscriptVariationAdaptor module, is it correct to say you only return 
polyphen and sift scores for existing variations? the readme file for 
the script does not say you cannot perform polyphen and sift on novel 
variations but the code appears to return undef if a score does not 
exist in the database.

thanks




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