[ensembl-dev] ncRNA gene trees

Albert Vilella avilella at ebi.ac.uk
Fri Nov 26 08:41:20 GMT 2010


Substituting "ProteinTree" for "NCTree" in the adaptor should just work.

On Fri, 2010-11-26 at 08:54 +0100, Julien Roux wrote:
> Dear Ensembl team
> 
> Is there a way to access the ncRNA gene trees via the Ensembl perl API?
> (for example miRNA trees like this one: 
> http://www.ensembl.org/Homo_sapiens/Gene/Compara_Tree?db=core;g=ENSG00000199024;r=20:3898141-3898218;t=ENST00000362154)
> After some tries, it seems that the usual methods working for protein 
> trees do not work for ncRNA trees...
> 
> Thanks for any tip
> Julien
> 






More information about the Dev mailing list