[ensembl-dev] ncRNA gene trees

Julien Roux julien.roux at unil.ch
Fri Nov 26 07:54:59 GMT 2010


Dear Ensembl team

Is there a way to access the ncRNA gene trees via the Ensembl perl API?
(for example miRNA trees like this one: 
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Tree?db=core;g=ENSG00000199024;r=20:3898141-3898218;t=ENST00000362154)
After some tries, it seems that the usual methods working for protein 
trees do not work for ncRNA trees...

Thanks for any tip
Julien

-- 
Julien Roux, PhD
http://www.unil.ch/dee/page38327.html
Keller group, Department of Ecology and Evolution
Biophore, University of Lausanne, 1015 Lausanne, Switzerland
tel: +41 21 692 4221    fax: +41 21 692 4165





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