[ensembl-dev] Gene biotype descriptions

[Bronwen Aken]

Hi Hardip,

The genes/transcripts with these biotypes are from Vega. The Vega website has a definition for each of their biotypes:
http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html

Cheers,
Bronwen


On 6 Dec 2010, at 21:50, Hardip Patel wrote:

> Hi All
> 
> I was just wondering if somebody can help me with the description of following gene biotypes. I was also interested in knowing what would be the evidence for/against any of these biotypes.
> 
>   
>  ambiguous_orf  
>  antisense  
>  retained_intron  
>  retrotransposed  
>  TEC  
>  transcribed_processed_pseudogene  
>  transcribed_unprocessed_pseudogene  
>  TR_gene  
>  TR_pseudogene  
>  unitary_pseudogene  
>  unprocessed_pseudogene  
>  nonsense_mediated_decay
> 
> Any help is greatly appreciated.
> Thanking you
> 
> -- 
> Hardip R. Patel
> Bioinformatician, Molecular Genetics Division,
> Victor Chang Cardiac Research Institute,
> Darlinghurst, NSW – 2010, Australia
> (W): +61 – 2 – 9295 8611
> (M): 0449 180 715
> 
> _______________________________________________
> Dev mailing list
> Dev at ensembl.org
> http://lists.ensembl.org/mailman/listinfo/dev

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