[ensembl-dev] Running array mapping with a second mysql instance

[Oliver, Gavin]

Hi all,

 

I'm currently running a second instance of mysql which uses a different
.sock file from the standard one.  I specify this on the command line
using "-S /path/to/sock".

 

I am wondering if I can easily use this instance for the efg array
mapping?

 

In the efg.config file it is easy to update the MYSQL_ARGS but I get the
feeling that the DNADB_SCRIPT_ARGS will cause more problems as this uses
other variables.  Would all the scripts that use the DNADB_SCRIPT_ARGS
variable have to be updated?

 

Best, 

 

Gavin

 

 

 


The contents of this message and any attachments to it are confidential and may be legally privileged. If you have received this message in error, you should delete it from your system immediately and advise the sender.

Almac Group (UK) Limited, registered no. NI061368.  Almac Sciences Limited, registered no. NI041550.  Almac Discovery Limited, registered no. NI046249.  Almac Pharma Services Limited, registered no. NI045055.  Almac Clinical Services Limited, registered no. NI041905.  Almac Clinical Technologies Limited, registered no. NI061202.  Almac Diagnostics Limited, registered no. NI043067.  All preceding companies are registered in Northern Ireland with a registered office address of Almac House, 20 Seagoe Industrial Estate, Craigavon, BT63 5QD, UK.  

Almac Sciences (Scotland) Limited, registered in Scotland no. SC154034. 

Almac Clinical Services LLC, Almac Clinical Technologies LLC and Almac Diagnostics LLC are Delaware limited liability companies and Almac Group Incorporated is a Delaware Corporation.  More information on the Almac Group can be found on the Almac website: www.almacgroup.com


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20100818/227416cd/attachment.html>