[ensembl-dev] Plants mirror question -- Oryza_sativa broken?

Michael Rogoff miker at htblis.com
Tue Aug 10 05:52:23 BST 2010


I set up a mirror of plants.ensembl.org, but Oryza_sativa and Oryza_indica aren't getting configured properly.    At /info/about/species.html, those species don't show up.  The other six do.

And if I go directly to /Oryza_sativa/Info/Index I get a 404 error.  The log contains the message:
File does not exist: /usr/local/ensembl/htdocs/Oryza_sativa

But, they are all mentioned upon server init:
------------------------------------------------------------------------------
-  INFO :   38.721 :    0.000 : Parser     >> Post processing ini files
------------------------------------------------------------------------------
-  INFO :   38.722 :    0.002 : munging    >> Arabidopsis_lyrata config
-  INFO :   38.727 :    0.005 : munging    >> Arabidopsis_thaliana config
-  INFO :   38.732 :    0.005 : munging    >> Oryza_indica config
-  INFO :   38.737 :    0.005 : munging    >> Oryza_sativa config
-  INFO :   38.738 :    0.002 : munging    >> Populus_trichocarpa config
-  INFO :   38.740 :    0.001 : munging    >> Sorghum_bicolor config
-  INFO :   38.741 :    0.001 : munging    >> Brachypodium_distachyon config
-  INFO :   38.746 :    0.005 : munging    >> Vitis_vinifera config

Can anyone point me in the right direction to debug this problem?  Thanks!!!









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