[ensembl-dev] Is homology adaptors DN/DS functions down?
Miguel Pignatelli
mp at ebi.ac.uk
Fri Feb 15 13:12:06 GMT 2013
Hi Carl,
On 14/02/13 21:24, Joe Carl wrote:
> The code was working yesterday, but is not working today. Is the
> homology adaptors acting up? I was trying to update code to get species
> names and now nothing works because I get an empty variable when I
> retrieve $homologies = $homology_adaptor->fetch_all_by_Members($member)
> such that
> for $homolog (@{$homologies->get_all_Members}) {
>
> never gets executed.
I think you have a typo. The method is called fetch_all_by_Member (note
the singular in "Member").
Let me know if this solves the issue.
Cheers,
M;
>
> Is something down? If so is there a way for me to check the status
> first so I don't get frustrated chasing a ghost? Is DN DS retrieval down?
>
> Joe
>
>
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