[ensembl-dev] Ensembl API not responding?

Stefano Giorgetti sgiorgetti at ebi.ac.uk
Wed Nov 27 15:22:50 GMT 2024


Hello Simon,

Thanks for flagging this up to us.

It seems the public DB is struggling now: I can sadly confirm "show 
databases" takes well over a minute to return, and "ping_ensembl.pl" 
script (you can find it under "misc_scripts" in the "ensembl" repo) 
takes about the same ... which makes sense as it does sort-of the same.

For the time being to speed up the registry loading, I'd suggest to 
switch verbose off and - if you can - to use the "-species" argument.

Meanwhile, I'll have someone looking into the performance issue.

Thanks for your patience

Stefano on behalf of the Ensembl Team


On 27/11/2024 13:16, Simon Andrews wrote:
>
> my $registry = 'Bio::EnsEMBL::Registry';
>
> $registry->load_registry_from_db(
>
>       -host => 'ensembldb.ensembl.org',
>
>       -user => 'anonymous',
>
>       -verbose => 1
>
> );
>
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