[ensembl-dev] Mix of Ovis aries strains

Sebastien Moretti sebastien.moretti at unil.ch
Mon Nov 4 09:58:16 GMT 2024


Hi

I wonder why files in FTP folders for Ovis aries, such as 
https://ftp.ensembl.org/pub/release-113/json/ovis_aries/, contain a 
specific strain in their name.
E.g. 
https://ftp.ensembl.org/pub/release-113/json/ovis_aries/ovis_aries_rambouillet.json
which is also in 
https://ftp.ensembl.org/pub/release-113/json/ovis_aries_rambouillet/

Also, the default strain for Ovis aries looks to be texel according to 
the species web page https://www.ensembl.org/Ovis_aries/Info/Annotation 
or 
https://www.ensembl.org/Ovis_aries/Gene/Summary?g=ENSOARG00000002633;r=4:113025302-113029357;t=ENSOART00000002851

So, is there a mix of strains between the web page and FTP?

Best

-- 
Sébastien Moretti
Staff Scientist
Department of Ecology and Evolution,
Biophore, University of Lausanne,
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4221
https://bioinfo.unil.ch/ https://www.bgee.org/ https://selectome.org/




More information about the Dev mailing list