[ensembl-dev] missing some used_ref fields in VEP json output

[Michael Yourshaw]

When I updated to the latest VEP I encountered a handful of transcripts in
the json output that did not contain a used_ref field. This seems to be a
problem introduced recently and does not affect the great majority of
variants.

An example record:

is attached.


ॐ
Michael Yourshaw
myourshaw at gmail.com <myourshaw at ucla.edu>

This message is intended only for the use of the addressee and may contain
information that is PRIVILEGED and CONFIDENTIAL, and/or may contain
ATTORNEY WORK PRODUCT. If you are not the intended recipient, you are
hereby notified that any dissemination of this communication is strictly
prohibited. If you have received this communication in error, please erase
all copies of the message and its attachments and notify us immediately.
Thank you.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20211022/bf5d31ef/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: M18-1950-TT at 10052021JH_ST.b37.map.dedup.sample-filtered.vcf.vep.json.GENE-less.WHSC1.json
Type: application/json
Size: 14065 bytes
Desc: not available
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20211022/bf5d31ef/attachment.json>