[ensembl-dev] Refseq cache file
Duarte Molha
duartemolha at gmail.com
Thu Apr 16 17:01:20 BST 2020
Dear Devs
I was wondering if you could help me with the source of the cache data for
VEP
ON this link
https://www.ensembl.org/info/docs/tools/vep/script/vep_cache.html
you list the refseq source of the transcripts used to this file:
*2019-06-28(GCF_000001405.39_GRCh38.p13_genomic.gff)*
This is great but I am interested in also getting the correct source for
the hg19 version
You have simply listed it as :
*2015-01*
And I have not been able to match this date to any of the GCF files
The latest I could find for GRCh37 is
https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.25/
but this file dates to 2013/06/28
Can you please point me where I can get the 2015-01 refseq GFF source file
you have used for the cache?
Best regards
Duarte
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