[ensembl-dev] Ensembl Gene ID of Motif Feature
anja at ebi.ac.uk
Wed Apr 29 12:47:32 BST 2020
we don’t have any information about the gene that is regulated by a given motif feature if that is what you were after. Please let me know if that is not the case. VEP returns gene IDs for variants which overlap transcripts.
> On 27 Apr 2020, at 16:35, Souhila Amanzougarene <souhila.amanzougarene at cnrs.fr> wrote:
> Hi Ensembl Developers,
> I used VEP to annotate vcf files, I'm interested by the MotifFeature. In the annotated file, I have only the ensembl motif ID (Feature column).
> Is there any way to get gene ID in addition of the ensembl motif ID.
> Best regards
> Souhila Amanzougarene
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