[ensembl-dev] can VEP output the distance of the variant to the exon junction?

David Tamborero david.tamborero at gmail.com
Thu Feb 21 11:09:15 GMT 2019

Dear all,

is any flag (which I cannot find) so the VEP output includes the distance
of the (coding) variant to the closest exon junction?

If not, somebody has a recommended fancy approach to do so? (My current
approach is 'just' to match with my own script the VEP output for a given
transcript with the exon coordinates data that can be retrieved in e.g.

many thanks in advance!
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