[ensembl-dev] problem with eQTL REST service?

[Thomas Juettemann]

Hi Andrew,

Thanks for getting in touch, and sorry for not getting back to you earlier.

We are investigating the problem. So far we can not replicate the issue locally, it is a problem with the live environment, which makes debugging more delicate. 

As we still use GTEX V6 (waiting for V8 release), you could use the Ensembl 95  archive: 

http://jan2019.rest.ensembl.org/

That should give you the same data. 
If you have any more questions, please don’t hesitate to ask.

Best wishes,
Thomas

 

On 15 Apr 2019, at 06:52, andrew126 at mac.com wrote:

Hi,

Apologies for the bump on this issue.  The error below still comes up on the REST documentation page and reflects what I see through the API.

Thanks for any help.

Best regards,

Andrew

> On Apr 11, 2019, at 4:23 AM, andrew126 at mac.com wrote:
> 
> Hi,
> 
> I'm writing to inquire about the status of the eQTL REST service.
> 
> The "Example output" here:
> 
> http://rest.ensembl.org/documentation/info/species_id
> 
> shows an error message:
> 
> {"error":"DBD::SQLite::db prepare failed: file is not a database at /nfs/public/release/ensweb/live/rest/www_96/ensembl/modules/Bio/EnsEMBL/DBSQL/DBConnection.pm line 704.\n"}
> Thanks for any guidance.
> 
> Best,
> 
> Andrew

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