[ensembl-dev] SNP - Gene filtering queries
ea8
ea8 at sanger.ac.uk
Mon Oct 8 09:47:33 BST 2018
Hi,
I am using biomaRt to query the ensembl for SNPs using 50-300 genes as
filter option.
However this process is very time consuming and most of the times i am
getting errors.
I also used the command in for loop by querying one gene at the time and
then combine the list.
I would like to ask if there is a faster way to query the SNPs. The only
information i need is the SNP id and the Gene id.
Best,
Manos
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