[ensembl-dev] Ensembl browser local install help
dawood.nih at gmail.com
Tue Jun 12 06:42:17 BST 2018
I was able to solve previous issues with Ensembl support staff
When I select species as "Apis mellifera" in All Genomes select box I am
getting the following error message
I have only one species "Apis mellifera" as select option in species
Function *EnsEMBL::Web::Component::Info::HomePage* fails to execute due to
the following error:
EnsEMBL/Web/Document/HTML/HomeSearch.pm did not return a true value at
line 24, <PRELOADS> line 1605.
BEGIN failed--compilation aborted at
... 24, <PRELOADS> line 1605.
Compilation failed in require at (eval 2554) line 2, <PRELOADS> line 1605.
I sent an email to Ensembl support but no reply for the last few days.
Could one of you suggest one support person with whom I can work constantly
to complete browser setup?
On Tue, Jun 5, 2018 at 11:54 AM, Dawood D <dawood.nih at gmail.com> wrote:
> I installed Ensembl browser on local server. I followed all the
> instruction on Ensembl local install page but I am getting the following
> Use of uninitialized value in sprintf at (eval 3072) line 1.
> Cannot dynamic_use EnsEMBL::Web::Document::HTML::HomeSearch: Attempt to
> reload EnsEMBL/Web/Document/HTML/HomeSearch.pm aborted.
> Compilation failed in require at (eval 2698) line 2, <PRELOADS> line 1683.
> Unknown Exception:
> hash- or arrayref expected (not a simple scalar, use allow_nonref to
> allow this) at /usr/local/share/perl5/JSON.pm line 170.
> Thrown by EnsEMBL::Web::Controller::process in module
> EnsEMBL::Web::Apache::SSI at /home/ensembl/local/ensembl//EnsEMBL/Web/Apache/SSI.pm
> on line 109
> Called by EnsEMBL::Web::Apache::SSI::handler in module
> EnsEMBL::Web::Apache::Handlers at /home/ensembl/local/ensembl//EnsEMBL/Web/Apache/Handlers.pm
> on line 505
> Called by EnsEMBL::Web::Apache::Handlers::handler in module main at -e
> on line 0
> Called by (eval) in module main at -e on line 0 at
> /home/ensembl/local/ensembl//EnsEMBL/Web/Exception.pm line 70.
> ERROR: b3381a61ec (/index.html) (Server Exception)
> Uncaught exception 'Unknown' with message 'hash- or arrayref expected (not
> a simple scalar, use allow_nonref to allow this) at
> /usr/local/share/perl5/JSON.pm line 170.
> Can somebody help on how to fix the above errors?
> I am trying to show ensembl browser with only one species Mus Musculus
> Please send info on how config and ini files should look like
> Thank you
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