[ensembl-dev] Mouse reference genome

Pankaj Agarwal p.agarwal at duke.edu
Thu Sep 28 12:38:38 BST 2017


Hi,
I was writing to ask if the mouse reference genome is based on the Black 6 (C57BL/6J) strain or some other or it is a combination.
There is a cell line genomic data set from C57BL/6J strain that I need to align to the reference and I wanted to check if the latest available reference in Ensembl would be the best.
Thanks,
- Pankaj

-----------------------------
Pankaj Agarwal, M.S
Bioinformatician
Data Analyst
Applied Therapeutics
Div. of Surgical Sciences
Dept. of Surgery
Duke University
M: 919-244-6389
O: 919-681-2251
p.agarwal at duke.edu<mailto:p.agarwal at duke.edu>

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