[ensembl-dev] Ensembl VM possible to use for house Ensembl installation?

Liu, Mingyi Mingyi.Liu at bms.com
Wed Jun 8 20:33:50 BST 2016


Hi, can anyone confirm my question below? Are the Ensembl VMs only for Ensembl API + Ensembl’s own MySQL access, or the VM has everything needed for in-house Ensembl installation (one just need to change some parameters to point to in-house MySQL etc)? If the latter that’d be fantastic, but so far it doesn’t look like the case.

Thanks!

Mingyi

From: Liu, Mingyi
Sent: Tuesday, June 07, 2016 1:48 PM
To: Ensembl developers list <dev at ensembl.org>
Subject: Ensembl VM possible to use for house Ensembl installation?

Hi,

I downloaded Ensembl VMs in the hope that this is an easy way to set up Ensembl in-house (once MySQL data are all downloaded/imported). However it seems that the VM doesn’t have webserver and is only meant to be used for running scripts that utilize Ensembl API?  Is that correct? I’m a bit confused as I thought one doesn’t need a VM to run scripts using Ensembl API, just need to download Ensembl/Bioperl and install dependency. So the VM is mostly for saving efforts installing dependency?

Thanks!

Mingyi
________________________________
This message (including any attachments) may contain confidential, proprietary, privileged and/or private information. The information is intended to be for the use of the individual or entity designated above. If you are not the intended recipient of this message, please notify the sender immediately, and delete the message and any attachments. Any disclosure, reproduction, distribution or other use of this message or any attachments by an individual or entity other than the intended recipient is prohibited.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://mail.ensembl.org/pipermail/dev_ensembl.org/attachments/20160608/398bb41c/attachment.html>


More information about the Dev mailing list