[ensembl-dev] Mapping genomic coordinates to CDS

[Greg Slodkowicz]

Dear all,
I'm working with a large (>500K) dataset of cancer mutations, all of which
fall in coding regions. In the format I was given, the mutated positions
are given as genomic (rather than CDS) coordinates. I noticed that the
Ensembl REST API has a feature to map from protein to genomic coordinates (
http://rest.ensembl.org/documentation/info/assembly_translation) but
apparently not the other way round. What would be the simplest way to
perform this kind of mapping?

Many thanks,
Greg
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