[ensembl-dev] accessing the tilepath entries programatically

Hiram Clawson hiram at soe.ucsc.edu
Tue Jun 30 15:30:18 BST 2015


I can't find this clone in any assembly, but if you take about
50 nucleotides from each end of the NCBI record:
    http://www.ncbi.nlm.nih.gov/nuccore/AF274853.3
and blat it to GRCh38 you find a similar sequence at:
    chrX:151,266,649-151,378,870

--Hiram

On 6/30/15 1:45 AM, Duarte Molha wrote:
> Dear devs
>
> How can I search for a specific clone id present on your tilepath
>
> for example this: RP5-892C22
>
> I would like to use the perl API if possible
>
> Many thanks
>
> Duarte




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