[ensembl-dev] Annotation problem in GRCh37 - LCE2B?

Christian Cole (Staff) C.Cole at dundee.ac.uk
Thu Aug 6 11:08:12 BST 2015


Hi,

I've noticed that adjacent genes LCE28 and LCE2C have exactly the same starting coordinate 1:152,647,771 despite the main transcripts being 10kb apart. This is inconsistent with Refseq, Gencode and GRCh38. What's the evidence behind transcript ENST00000417924 which spans both gene loci and has a 12kb intron?

GRCh38 doesn't have this. Any chance for a 'fix'?
Cheers,

Chris


The University of Dundee is a registered Scottish Charity, No: SC015096
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