[ensembl-dev] question regarding geneadaptor
Duarte Molha
duartemolha at gmail.com
Tue Nov 4 12:03:19 GMT 2014
Dear developer
I have simple script to fetch gene information and I am having problems
with a particular gene that I know is correct and on the database:
http://grch37.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000205702;r=22:42536214-42540576
here is the code I use to fecth it:
$query_gene = "CYP2D7P";
my @fetched_genes =
@{$gene_adaptor->fetch_all_by_display_label($query_gene)};
however ...
this method returns an empty list.
Why is this?
I have also tried:
my @fetched_genes = @{
$gene_adaptor->fetch_all_by_external_name($query_gene) };
and this also fails.
Can someone tell me what I am doing wrong?
Best regards
Duarte
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