[ensembl-dev] Alternative to fetch_nearest_Gene_by_Feature ?
Kieron Taylor
ktaylor at ebi.ac.uk
Wed Mar 12 15:24:46 GMT 2014
Hi Jerome,
fetch_nearest_Gene_by_Feature has never been very reliable for all the
uses to which it is put. We are in the process of testing a replacement
that applies to all kinds of features, but it is not yet ready for
public release. We hope to bring it into service soon. Our apologies for
leaving you without an alternative, but you are free to continue using
fetch_nearest_Gene_by_Feature.
Kieron Taylor
Ensembl Core Team
On 12/03/2014 15:17, Jerome Dauvillier wrote:
> Hi Ensembl dev team,
>
> Is there in version 75 of the API an alternative to the deprecated method
> Bio::EnsEMBL::DBSQL::GeneAdaptor::fetch_nearest_Gene_by_Feature ?
>
> Would be much appreciated...
>
> Best,
>
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