[ensembl-dev] Error on cache mismatch

[Konrad Karczewski]

Hi VEP crew,

I've been trying to use newer versions of VEP (77/78) with older versions of the cache (74) and seem to be running into some issues (stack trace below). Any ideas?

Thanks!
-Konrad

-------------------- EXCEPTION --------------------
MSG: Can not find internal name for species 'homo_sapiens'
STACK Bio::EnsEMBL::Registry::get_adaptor /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Registry.pm:987
STACK Bio::EnsEMBL::DBSQL::DBAdaptor::AUTOLOAD /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/DBSQL/DBAdaptor.pm:1016
STACK Bio::EnsEMBL::Translation::get_all_Attributes /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Translation.pm:995
STACK Bio::EnsEMBL::Translation::get_all_SeqEdits /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Translation.pm:1069
STACK Bio::EnsEMBL::Variation::BaseTranscriptVariation::_selenocysteine_positions /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/BaseTranscriptVariation.pm:733
STACK Bio::EnsEMBL::Variation::TranscriptVariationAllele::peptide /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/TranscriptVariationAllele.pm:248
STACK Bio::EnsEMBL::Variation::TranscriptVariation::pep_allele_string /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/TranscriptVariation.pm:230
STACK Bio::EnsEMBL::Variation::TranscriptVariation::_prefetch_for_vep /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/TranscriptVariation.pm:436
STACK Bio::EnsEMBL::Variation::Utils::VEP::whole_genome_fetch_transcript /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/Utils/VEP.pm:3143
STACK Bio::EnsEMBL::Variation::Utils::VEP::whole_genome_fetch /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/Utils/VEP.pm:2997
STACK Bio::EnsEMBL::Variation::Utils::VEP::vf_list_to_cons /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/Utils/VEP.pm:1387
STACK Bio::EnsEMBL::Variation::Utils::VEP::get_all_consequences /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/Bio/EnsEMBL/Variation/Utils/VEP.pm:1271
STACK main::main /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/variant_effect_predictor.pl:280
STACK toplevel /humgen/atgu1/fs03/konradk/ensembl-tools-release-77/scripts/variant_effect_predictor/variant_effect_predictor.pl:144
Date (localtime)    = Wed Dec  3 20:13:21 2014
Ensembl API version = 77
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