[ensembl-dev] API function for searching by gene name changed?

[Dan Staines]

On 10/04/2013 03:50 PM, Adam Witney wrote:
>
> I am trying to pull genes out by their gene name (e.g. pmrA in species
> "pseudomonas_aeruginosa*"), in a previous release I used this function:
>
> my $genes = $dba->get_GeneAdaptor()->fetch_all_by_external_name("pmrA");

Hmm, can you give me an example of one of the P. aeruginosa DBAs you'd 
seen this working with before so I can try and figure out whats going on?

Thanks,

Dan.

-- 
Dan Staines, PhD
Technical Coordinator, Ensembl Genomes
European Bioinformatics Institute (EMBL-EBI)
http://www.ebi.ac.uk/
http://www.ensemblgenomes.org/