[ensembl-dev] Source of refseq data in otherfeatures

Reece Hart reece at harts.net
Mon Jun 10 06:14:31 BST 2013


On Tue, Jun 4, 2013 at 6:26 AM, Rishi Nag <rn6 at sanger.ac.uk> wrote:

> Data are downloaded from the NCBI website.
>

Which data? Do you use the seq_gene.md files? GFF? Eutils?

On Tue, Jun 4, 2013 at 6:41 AM, Thibaut Hourlier <th3 at sanger.ac.uk> wrote:

> Just to add to RIshi's answer; only the sequences from RefSeq which align
> the genome of interest are stored in the otherfeatures database
>

Do you have details about how refseq data are loaded?

Thanks,
Reece
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