[ensembl-dev] Source of refseq data in otherfeatures

Reece Hart reece at harts.net
Tue Jun 4 02:22:29 BST 2013


Greetings-

I'm trying to gauge whether ensembl might provide a kinder, gentler
interface to refseq data than that provided by EUtils.

What's the source of the refseq data in otherfeatures?

How current is the otherfeatures data?

What reconciliation is done when there are substitutions (e.g., VHL,
TNFRSF10C, SERPINE2) or indels (NEFL, ABO, ZAN) in the transcript relative
to GRCh37?

Thanks,
Reece
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