[ensembl-dev] GERP_CONSERVATION_SCORE
cj5 at sanger.ac.uk
cj5 at sanger.ac.uk
Thu Feb 7 17:00:16 GMT 2013
Hi
The example script for getting gerp scores
http://www.ensembl.org/Help/Faq?id=221
seems to have beem removed
I had an old api script which did this using
my $mlss_adaptor = $reg->get_adaptor("Multi", "compara", "MethodLinkSpeciesSet");
$mlss_adaptor->fetch_by_method_link_type_species_set_name("GERP_CONSERVATION_SCORE", "mammals");'.
But this produces an error in version 70,
"Can't call method "fetch_by_method_link_type_species_set_name" on an undefined value
So how do I get GERP scores using the version 70 API?
Thanks
Chris Joyce
Sanger Institute
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