[ensembl-dev] VEP script Warnings
Duarte Molha
duartemolha at gmail.com
Thu Dec 12 09:57:17 GMT 2013
Dear Developers,
I believe this is more a question for Will but feel free to educate me if
what I am saying makes no sense :-)
I read and develop my analysis scripts in Eclipse and it seems there are 2
lines on the VEP script that trigger warnings in eclipse:
# copy to Slice for offline sequence fetching
$Bio::EnsEMBL::Slice::config = $config;
and
# cluck and display executed SQL?
$Bio::EnsEMBL::DBSQL::StatementHandle::cluck = 1 if
defined($config->{cluck});
Warnings:
Name "Bio::EnsEMBL::Slice::config" used only once: possible typo
and
Name "Bio::EnsEMBL::DBSQL::StatementHandle::cluck" used only once: possible
typo
Are these statements really required if there are not used anywhere else in
the script?
Best regards
Duarte
=========================
Duarte Miguel Paulo Molha
http://about.me/duarte
=========================
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