[ensembl-dev] Get the gaps of a given assembly

[Sarah Djebali]

Dear developpers,

I am doing a transcriptome analysis of different species over the time (ie
for different ensembl versions), and I need to know where the gaps are
located for different assemblies of different species, is there an easy way
to do this automatically?

I would need in particular the gaps for:
- Caenorhabditis_elegans WBcel215
- Caenorhabditis_elegans WS220
- Saccharomyces_cerevisiae EF2
- Saccharomyces_cerevisiae EF3
- Saccharomyces_cerevisiae EF4

thanks!
Sarah

-- 
***********************************************************
Sarah Djebali - Post-doctoral researcher
Center for Genomic Regulation (CRG)
Doctor Aiguader, 88  - 08003 BARCELONA
Tel. +34 933 160 167 - Fax +34 933 160 099
sarah.djebali at crg dot es
http://big.crg.cat/bioinformatics_and_genomics
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