[ensembl-dev] perl api question

[Gary Duncan]

the login info is bogus off at old not longer functioning server so no big
deal
thanks will look in to it


On Mon, Apr 15, 2013 at 11:18 AM, Kieron Taylor <ktaylor at ebi.ac.uk> wrote:

> Hi Gary,
>
> The IDs you are quizzing Ensembl with are unknown to me. I can only find
> them in "dictyBase", which we do not refer to. They may be stable IDs of a
> sort, but not of Ensembl origin, therefore using fetch_by_stable_id will
> return nothing.
>
> The code itself looks ok.
>
> If you have the information readily available, you should try using the
> gene names instead ( ->fetch_by_display_name ), or find other identifiers
> that you can feed into our Xref system. ( ->fetch_by_external_name )
>
> There is a password for you local database in the script you sent to the
> mailing list. If this is a security concern, you should change it
> immediately.
>
> Regards,
>
> --
> Kieron Taylor PhD.
> Ensembl Core team
> EBI
>
>
> On 15/04/2013 16:43, Gary Duncan wrote:
>
>> the Perl scrip list all databases but doesn't download the files I
>> have attached the Perl script and the data file with ids.  Please help
>> and thanks for your help in this matter.
>>
>>
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>
>
>
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