[ensembl-dev] Exporting regions

Stefan Kirov stefan.kirov at bms.com
Mon Sep 10 03:45:14 BST 2012


Guys,
When exporting genbank for a region I see things like that:

      misc_RNA        join(complement(AC009121.8:51066..51103),
                      complement(AC009121.8:46967..47862))

I was under the impression that the coordinates for any feature would be based on the coordinate system used to export, not a contig based coordinate system.
To make things worse sometimes it seems that the coordinate system is the exported slice and sometimes it is mixed.
Is this the expected behavior or a bug?
Thanks!
Stefan





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