[ensembl-dev] bug in gene_density_calc.pl
Sharon Wei
weix at cshl.edu
Tue Nov 13 16:34:50 GMT 2012
Hi Ensembl Developers,
There seems to be bugs in
ensembl/misc-scripts/density_feature/gene_density_calc.pl in the past
release 69.
The following sqls are not working
line 127
-SQL=>"select distinct display_label, description from
analysis_description where is_current = 1 and logic_name =
'knowngenedensity'"
should be
-SQL=>"select distinct display_label, description from
analysis_description ad join analysis a using (analysis_id) where
a.logic_name = 'knowngenedensity'"
line 151:
-SQL=>"select distinct display_label, description from
analysis_description where is_current = 1 and logic_name = 'genedensity'"
Should be
-SQL=>"select distinct display_label, description from
analysis_description ad join analysis a using (analysis_id) where
a.logic_name = 'genedensity'"
Sharon
More information about the Dev
mailing list