[ensembl-dev] Sus scrofa is not a valid species name?

Dan Staines dstaines at ebi.ac.uk
Thu Jun 21 07:22:03 BST 2012

On 06/21/2012 12:42 AM, Alexander Pico wrote:
> Great. That worked for pig. But I’m now stuck on the bacteria
> collections, specifically:
> escherichia_shigella_collection
> bacillus_collection
> mycobacterium_collection
> I’ve tried the above, plus ‘escherichia_coli’ (which used to work) and
> ‘Escherichia coli’.  Any suggestions for these species in v67?

Bacteria are handled by Ensembl in a different way to other species, so 
just to be clear - can you let us know a bit more about what you're 
trying to achieve, preferably with a bit of example Perl code?



Dan Staines, PhD               Ensembl Genomes Technical Coordinator
EMBL-EBI                       Tel: +44-(0)1223-492507
Wellcome Trust Genome Campus   Fax: +44-(0)1223-494468
Cambridge CB10 1SD, UK         http://www.ensemblgenomes.org/

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