[ensembl-dev] getting EntrezGene IDs from Ensembl $gene

Jerry Li jli94080 at gmail.com
Thu Aug 30 04:13:14 BST 2012


foreach my $slice (@$slices) {
  # fetch genes from rnaseq
  my $genes = $slice->get_all_Genes($logic_name);
  foreach my $gene (@$genes) {
foreach my $dbes ($gene->get_all_DBLinks("EntrezGene")){
            foreach my $dbe (@{$dbes}){
                print $dbe->primary_id(), "\t";
            }
        }
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