[ensembl-dev] [BioMart Users] ensembl_peptide_shift attribute has disappeared from BioMart

Sébastien Moretti sebastien.moretti at unil.ch
Thu May 19 14:45:56 BST 2011


Okay

Thanks

> Hi Sébastien
> I will reinstate this for release 63. Apologies for any inconvenience.
> Regards
> Rhoda
>
>
> On 19 May 2011, at 13:31, Sébastien Moretti wrote:
>
>> Hi
>>
>> With the former Ensembl releases I was able to retrieve peptide shift
>> for non-synonymous snps from biomart.
>>
>> Now it seems that this attribute has disappeared from biomart, but
>> this information is still available on the ensembl web interface.
>>
>>
>> Do you plan to re-implement this attribute again in Biomart ?
>
> Rhoda Kinsella Ph.D.
> Ensembl Bioinformatician,
> European Bioinformatics Institute (EMBL-EBI),
> Wellcome Trust Genome Campus,
> Hinxton
> Cambridge CB10 1SD,
> UK.

-- 
Sébastien Moretti
SIB Vital-IT EMBnet, Quartier Sorge - Genopode
CH-1015 Lausanne, Switzerland
Tel.: +41 (21) 692 4079/4221
http://www.vital-it.ch/ http://ch.embnet.org/ http://myhits.vital-it.ch/




More information about the Dev mailing list