[ensembl-dev] [SPAM] - Re: [SPAM] - Re: Transcript variation alleles - - Bayesian Filter detected spam - Email found in subject

[Pontus Larsson]

Hi Gavin,

Please note that in the current release (61), we are missing this 
validation status for many variations. This happened because this data 
was not present in the dbSNP data we had access to at the time of the 
import. (See the 'known bugs' page 
http://www.ensembl.org/info/docs/knownbugs.html). I have put a 
tab-separated file containing the current dbSNP validation statuses 
(exported on Jan 20) for each rsId on the ftp site: 
ftp://ftp.ebi.ac.uk/pub/software/ensembl/snp/human/e61_rsid_validation_status.txt.gz. 


You should be able to get the validation status from there. Apologies 
for this inconvenience.

Thanks
/Pontus Larsson - Ensembl Variation


On 07/02/2011 09:55, Oliver, Gavin wrote:
> Thanks Graham/Fiona,
>
>
> Really all I want to do at the moment is get a 'validated' or
> 'unvalidated' value for each variation I consider.
>
>